RetrogeneDB ID: | retro_tbel_1059 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3730:129196..129493(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTBEG00000006726 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 87.88 % |
Parental protein coverage: | 58.93 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | LIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKS |
LIPAPRGTGI.SAP.PKKLL.MAG.DD.YTSARGCTATLGNFAKATFD.ISKTYSYLT.DLWKETVFTKS | |
Retrocopy | LIPAPRGTGIISAPMPKKLLLMAGLDDGYTSARGCTATLGNFAKATFDTISKTYSYLTLDLWKETVFTKS |
Parental | PYQEFTDHLVKTHTRVSVQRTQAPAVATT |
PYQEFTDH..KTHTRVSVQRTQ.P..ATT | |
Retrocopy | PYQEFTDHFIKTHTRVSVQRTQGPVMATT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |