RetrogeneDB ID: | retro_tbel_586 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2488:154168..154615(+) | ||
Located in intron of: | ENSTBEG00000016951 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTBEG00000006726 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 75.17 % |
Parental protein coverage: | 88.69 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | GHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGI |
GH.GLGV.CSKEV.T.I.GAIILAKLSIVPV.RG.WGNKIGKPHTVPCK.T..CGSVLV.LIPA.RGTGI | |
Retrocopy | GHIGLGVMCSKEVVTTI*GAIILAKLSIVPVQRGSWGNKIGKPHTVPCKGTDHCGSVLVCLIPALRGTGI |
Parental | VSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLV |
VSAPV.KKLL.M..IDDCYTSA.GCT..L..F.KA.FDAISKTYSYL..DL...TVF..SPYQ.F.DHL. | |
Retrocopy | VSAPVTKKLLLMTDIDDCYTSAWGCTTLLCSFVKAHFDAISKTYSYLIADL*TKTVFIESPYQKFIDHLL |
Parental | KTHTRVSVQ |
KTHT...V. | |
Retrocopy | KTHTSLGVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |