RetrogeneDB ID: | retro_tbel_1444 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4735:147088..147591(-) | ||
Located in intron of: | ENSTBEG00000012144 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTBEG00000006726 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 95.86 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | AFVAIG-DYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVR |
AFVAIG.DYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWG.KIGKPHTVPCKVT..CGSVLV. | |
Retrocopy | AFVAIG<DYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGKKIGKPHTVPCKVTSLCGSVLVH |
Parental | LIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKS |
LIPA.RGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPD.WKETVFTKS | |
Retrocopy | LIPALRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDIWKETVFTKS |
Parental | PYQEFTDHLVKTHTRVSVQRTQAPAVATT |
PYQEFTDHLVKTHTRVSVQRTQAPAVATT | |
Retrocopy | PYQEFTDHLVKTHTRVSVQRTQAPAVATT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |