RetrogeneDB ID: | retro_tbel_3509 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_14313:4056..4364(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTBEG00000006726 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 67.31 % |
Parental protein coverage: | 61.31 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | SVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKET |
SV.V.LIPAP.G.GI..APVPKK.L..AGID.CYTS...CTATLGNF.K..FDAISKTYSYLTP.LWKE. | |
Retrocopy | SVMVCLIPAPSGIGIILAPVPKKVLLIAGIDNCYTSTKSCTATLGNFTKVNFDAISKTYSYLTPYLWKEI |
Parental | VFTKSPYQEFTDHLV-KTHTRVSVQRTQAPAVAT |
.FTKSP...FTD.L..K.H.RV.VQR.....V.T | |
Retrocopy | TFTKSPDPKFTDYLA<KFHIRVAVQRNLTQDVTT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |