RetrogeneDB ID: | retro_tbel_1910 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5983:698754..699092(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTBEG00000006726 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 84.21 % |
Parental protein coverage: | 67.26 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | PCK-VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYS |
PC..VT.RCGSVLVRLIPAPRGTGIV.A.VPKKLL...GIDDCYTSARG.TA.LGNFAKATFDAISKTYS | |
Retrocopy | PCR<VTSRCGSVLVRLIPAPRGTGIVCARVPKKLLLLTGIDDCYTSARGSTAILGNFAKATFDAISKTYS |
Parental | YLTPDLWKETVFTKSPYQEFTDHLVKTHTRVSVQRTQAPAVATT |
Y.TP...KET.F.KSPYQEFT.HLVKTHTRVSVQRTQAPAVAT. | |
Retrocopy | YPTPGF*KETMFIKSPYQEFTSHLVKTHTRVSVQRTQAPAVATS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |