RetrogeneDB ID: | retro_tbel_603 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2528:659848..660352(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTBEG00000006726 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 84.52 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | AFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRL |
AFVA.GDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPV.RGYWGNKI.KPHTVPCKVTG.CGSVL..L | |
Retrocopy | AFVAMGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVWRGYWGNKISKPHTVPCKVTGCCGSVLACL |
Parental | IPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSP |
IPA.RGTG.VS.P.PKK.L.M..IDDCY.SA.G.TATL.NF.KATFDAISKTYSY.TPDL.KETVFTKSP | |
Retrocopy | IPAARGTGVVSDPMPKKQLLMTDIDDCYSSAWGSTATLDNFSKATFDAISKTYSYMTPDLGKETVFTKSP |
Parental | YQEFTDHLVKTHTRVSVQRTQAPAVATT |
Y.EFTDHLVKTHTRV..QRTQ.P.VATT | |
Retrocopy | YREFTDHLVKTHTRVYLQRTQTPVVATT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |