RetrogeneDB ID: | retro_ogar_1670 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873560.1:4551209..4551460(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPLP1 | ||
Ensembl ID: | ENSOGAG00000029641 | ||
Aliases: | None | ||
Description: | ribosomal protein, large, P1 [Source:HGNC Symbol;Acc:10372] |
Percent Identity: | 66.67 % |
Parental protein coverage: | 78.07 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | DKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI-CNVGAGGPAPAAG-AAPAGGPA-PSTAAAPAEEK |
..I..LIKAAG..VEP.W.G.FAKAL....I.SL..C..GA....PAAG.AAPAGGPA.PSTAAA.A.EK | |
Retrocopy | NRISSLIKAAGIKVEPLWAGWFAKALGKARIRSLT<CSAGA----PAAG<AAPAGGPA<PSTAAASAAEK |
Parental | KVE-AKKEESEESDDDMGFGLFD |
K.E.AK.E.SEESDDD.GFGLFD | |
Retrocopy | KGE<AKEEASEESDDDAGFGLFD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |