RetrogeneDB ID: | retro_ogar_2215 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873602.1:8039350..8039618(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPLP1 | ||
Ensembl ID: | ENSOGAG00000029641 | ||
Aliases: | None | ||
Description: | ribosomal protein, large, P1 [Source:HGNC Symbol;Acc:10372] |
Percent Identity: | 70.65 % |
Parental protein coverage: | 79.82 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MASVSELAC-IYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPA |
MAS.SEL.C.IY..LILHDDEVTV.EDKI.ALIKAAGVNVEPF.PGLFAKALANVNI..LICNV.AGGP. | |
Retrocopy | MASISELSC>IYWVLILHDDEVTVMEDKISALIKAAGVNVEPF*PGLFAKALANVNIRRLICNVRAGGPG |
Parental | PAAGAAPAGGPAPSTAAAPAEE |
.A...APA......T.....EE | |
Retrocopy | LA--SAPAEEKKVETKKKESEE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |