RetrogeneDB ID: | retro_ogar_961 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873531.1:30093874..30094131(-) | ||
Located in intron of: | ENSOGAG00000000466 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPLP1 | ||
Ensembl ID: | ENSOGAG00000029641 | ||
Aliases: | None | ||
Description: | ribosomal protein, large, P1 [Source:HGNC Symbol;Acc:10372] |
Percent Identity: | 75.86 % |
Parental protein coverage: | 75.44 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAP |
MASVSE..C...A.IL...EVT..E.KINALIKAAGVNVEPF.PGLF.KALANVNI.SLICN.GA.GP.P | |
Retrocopy | MASVSEFGCVCLAFILQEGEVTIREEKINALIKAAGVNVEPFRPGLFTKALANVNIRSLICNIGADGPTP |
Parental | AAGAAPAGGPA-PSTAA |
AAGA.PAG.PA.PSTAA | |
Retrocopy | AAGAVPAGHPA<PSTAA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |