RetrogeneDB ID: | retro_ggor_2381 | ||
Retrocopylocation | Organism: | Gorilla (Gorilla gorilla) | |
Coordinates: | 6:137082112..137082328(+) | ||
Located in intron of: | ENSGGOG00000000974 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPLP1 | ||
Ensembl ID: | ENSGGOG00000003980 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 76.39 % |
Parental protein coverage: | 63.16 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPA |
SALILH..EVTV.EDKINALIK.AGVNVEPFW.GLFAKALANV..GSLICN.GA.GPAPA.G.AP..... | |
Retrocopy | SALILHEGEVTVKEDKINALIKVAGVNVEPFWTGLFAKALANVDMGSLICNGGARGPAPAEGPAPSINAV |
Parental | PS |
P. | |
Retrocopy | PA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain_prefrontal_cortex | 0 .00 RPM | 66 .27 RPM |
SRP007412_cerebellum | 0 .04 RPM | 80 .18 RPM |
SRP007412_heart | 0 .00 RPM | 158 .29 RPM |
SRP007412_kidney | 0 .04 RPM | 154 .31 RPM |
SRP007412_liver | 0 .00 RPM | 293 .98 RPM |
SRP007412_testis | 0 .10 RPM | 83 .92 RPM |
Species | RetrogeneDB ID |
---|---|
Homo sapiens | retro_hsap_3523 |