RetrogeneDB ID: | retro_ogar_500 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873522.1:47026756..47027082(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPLP1 | ||
Ensembl ID: | ENSOGAG00000029641 | ||
Aliases: | None | ||
Description: | ribosomal protein, large, P1 [Source:HGNC Symbol;Acc:10372] |
Percent Identity: | 58.26 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPF-WPGLFAKALANVNIGSLICNVGAGGPA |
MAS.S.LAC.Y.ALILH..EVTVTE..INALIKAAGVN.E.F.WPGL.AKA..NVNIGSL.C..G..... | |
Retrocopy | MASASDLACVYWALILHVNEVTVTEGMINALIKAAGVNNEHF<WPGLCAKAMVNVNIGSLLCTRG-WRTC |
Parental | PAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD |
........G...PSTAA.P..E.......EESE.S.D.M.FGL.D | |
Retrocopy | SSSWCCTSGRAWPSTAAPPPTE----GEQEESEQSSDVMCFGLLD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |