RetrogeneDB ID: | retro_tsyr_1147 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_324402:1..475(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 90.57 % |
Parental protein coverage: | 70.67 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | GHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHNSPCKVTGRCGSVLVRLIPAPRGTGI |
GHV.L.VKCSK.VATAI.G.IIL.KLSIVPVRRGYWGNKIGKPH..PCKVT.RCGSVLVR.IPAPRGTGI | |
Retrocopy | GHVSLSVKCSK-VATAIWGDIILVKLSIVPVRRGYWGNKIGKPHTVPCKVTSRCGSVLVRRIPAPRGTGI |
Parental | VSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLV |
V.APVPKKLLMMAGIDDCYTSARGCTATLGNF.KATFDAISKTYSYLTPDLW.ETVFTKSPYQEFT.HLV | |
Retrocopy | VLAPVPKKLLMMAGIDDCYTSARGCTATLGNFTKATFDAISKTYSYLTPDLWQETVFTKSPYQEFTNHLV |
Parental | KTHTRVSMQRTQAPAVSTT |
KTHTRVSMQRTQAPAV.TT | |
Retrocopy | KTHTRVSMQRTQAPAVATT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |