RetrogeneDB ID: | retro_tsyr_650 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_160455:1419..2049(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 74.76 % |
Parental protein coverage: | 93.33 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | FSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRG |
F.LP.KESEII..FLG.SLK.EVL.IM..QKQT..GQ.TRFK.FVA.G...G.VGLGVKCSK.VATAI.G | |
Retrocopy | FFLPVKESEIIRNFLGTSLKVEVLQIMTMQKQTHTGQQTRFKVFVATGICSGRVGLGVKCSKGVATAI*G |
Parental | AIILAKLSIVPVRRGYWGNKIGKPHNSPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCY |
AIILA.L...PV.RGY.GN.IGKP...PCKVTGRCGSVLV.LIPAP.G..IV.AP..K.LLMM.GIDDCY | |
Retrocopy | AIILAMLFFIPVWRGY*GNSIGKPYTVPCKVTGRCGSVLVPLIPAPKGIVIVLAPMAKTLLMMVGIDDCY |
Parental | TSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVKTHTRVSMQRTQAPAVSTT |
TSARGCTATLGNFAK.TFDAISK..S..TPDLWKETVF.KS.YQEFTDHL.KT.TRVS..RTQAP.V..T | |
Retrocopy | TSARGCTATLGNFAKTTFDAISKALSSVTPDLWKETVFAKSFYQEFTDHLIKTLTRVSVHRTQAPVVAAT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |