RetrogeneDB ID: | retro_tsyr_1568 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_493290:675..1071(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 63.97 % |
Parental protein coverage: | 59.56 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | LSIVPVRRGYWGNKIGKPHNSPCKVTGRCGSVLVRLI-PAPRGTGIVSAPVPKKLLMMAG-IDDCYTSAR |
L.IV....GY.G.K..KPH..PCKVTG.CGSVL..L..P.PR.TGIV.APV..K.L......DD.YTS.. | |
Retrocopy | LPIVLMQGGY*GSKTSKPHMLPCKVTGHCGSVLRCLT<PGPRNTGIVLAPV-LKKLLLMS>VDDRYTSPK |
Parental | GCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVKTHTRVSMQRTQAPAVSTT |
GCTATL.NF.KATFDAISK.YS.LTP.LW.ETVF...P.QEFTDH.VKTHT...MQ.TQ.PAV..T | |
Retrocopy | GCTATLANFTKATFDAISKAYSHLTPNLWRETVFANFPSQEFTDHFVKTHTSL-MQGTQVPAVAIT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |