RetrogeneDB ID: | retro_tsyr_568 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_141057:0..650(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 88.07 % |
Parental protein coverage: | 96.44 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KSLEENYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSK |
.SLEE.YLFSLPIKESEIIDFFLGASLKDEVLKI.PVQKQTR.GQRTRFKAFVAIGDYNGHVGLGVKCSK | |
Retrocopy | QSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIIPVQKQTRTGQRTRFKAFVAIGDYNGHVGLGVKCSK |
Parental | EVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHNSPCKVTGRCGSVLVRLIPAPRGTGIVSA-PVPKKLL |
EVATAI.G.IILAKLSI.PV.RGYW.NKIGK.H...CKVTGRCGSVLV.LIPAP.GTGIVSA.PVPKKL. | |
Retrocopy | EVATAIWGTIILAKLSIIPVQRGYWSNKIGKAHTVLCKVTGRCGSVLVCLIPAPSGTGIVSA<PVPKKLP |
Parental | MMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVKTHTRVSMQR |
MMA..DDCYTSARGCTATLGNFAKATFDAI.KTYSYL.P.LWKETVFT.SPYQEFTDHL.KTHTRVSMQR | |
Retrocopy | MMAEMDDCYTSARGCTATLGNFAKATFDAITKTYSYLPPNLWKETVFTRSPYQEFTDHLIKTHTRVSMQR |
Parental | TQAPAVST |
TQAP.V.T | |
Retrocopy | TQAPTVAT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |