RetrogeneDB ID: | retro_tsyr_1509 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_47016:8137..8657(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 84.66 % |
Parental protein coverage: | 77.33 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | EVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKI |
EVLKIMPVQKQTRAGQ.TRFKAFVAIG..NGHVGL.VKC.KEVATAIRG.I.LAKLSI.PV.RGYWGNKI | |
Retrocopy | EVLKIMPVQKQTRAGQWTRFKAFVAIGNCNGHVGLAVKCDKEVATAIRGTITLAKLSILPV*RGYWGNKI |
Parental | GKPHNSPCKVTGRCGSVLVRLIPAPRGTGIVSA-PVP-KKLLMMAGIDDCYTSARGCTATLGNFAKATFD |
GKPH..PCK.TGRCGSVLV.LI.A.RGTGIVSA.P.P.K.LLMMAGIDDCYT.ARGCTATL.NF.KATFD | |
Retrocopy | GKPHTVPCKETGRCGSVLVGLISALRGTGIVSA<PCP<KQLLMMAGIDDCYTLARGCTATLSNFTKATFD |
Parental | AISKTYSYLTPDLWKETVFTKSPYQEFTDHLVKTHT |
.ISKTYSYLTPDLWKET.FTKSP.Q.FTDHLV.THT | |
Retrocopy | TISKTYSYLTPDLWKETIFTKSPNQKFTDHLVNTHT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |