RetrogeneDB ID: | retro_tsyr_1466 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_45134:4463..5135(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 90.22 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | LVKDMKIKSLEENYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVG |
LVKDMK.KSLE...LFSLPIKESEIIDFFLGASLKDEV.KIMPVQKQTR.GQRTR.KAFVAIGDY.GHV. | |
Retrocopy | LVKDMKVKSLEIS-LFSLPIKESEIIDFFLGASLKDEVWKIMPVQKQTRTGQRTRVKAFVAIGDYKGHVS |
Parental | LGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHNSPCKVTGRCGSVLVRLIPAPRGTGIVSAP |
LGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPH..PCKVTGRCGSVLV.LIPAPRGTGIVSAP | |
Retrocopy | LGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVCLIPAPRGTGIVSAP |
Parental | VPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVKTHT |
VPK.L.MMAGIDDCYTSAR.C.ATLGNFAKATFDAISKTYSYLTPDLWKETVFTK.P.QEFTD.LVKTHT | |
Retrocopy | VPKQLFMMAGIDDCYTSARSCIATLGNFAKATFDAISKTYSYLTPDLWKETVFTKFPSQEFTDNLVKTHT |
Parental | RVSMQRTQAPAVSTT |
RV.MQRTQ.PAV.TT | |
Retrocopy | RVTMQRTQTPAVPTT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |