RetrogeneDB ID: | retro_tsyr_349 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_102:63780..64192(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 67.86 % |
Parental protein coverage: | 61.33 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | LVKDMKIKSLEENYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVG |
LVKD.KIKSLEE..LF.L.I.ESEII..FL.A.LKDE.LK.M..QKQTRAG..TRFKA.VA.GDYNGH.G | |
Retrocopy | LVKDTKIKSLEEICLFFLLI*ESEIIESFLRACLKDETLKMMSLQKQTRAGPGTRFKALVAMGDYNGHIG |
Parental | LGVKCSKEVATAIRGAIILAKLSIVPVRRGY-WGNKIGKPHNSPCK-VTGRCGSVLVRLIPAPRGTGIVS |
L.VKCSK.VAT.I.G..IL.K...VPVRR.Y..G.K.GKPH..PCK..TG.C..V.V.LIPA..GTGIVS | |
Retrocopy | LSVKCSKGVATTIPGTMILVKILYVPVRRIY<LGDKMGKPHTIPCK<GTGCCTYVKVHLIPAH*GTGIVS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |