RetrogeneDB ID: | retro_tsyr_691 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_170676:1995..2663(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 92.48 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | LVKDMKIKSLEENYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVG |
LVKDMKIKSLEE.YLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVG | |
Retrocopy | LVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVG |
Parental | LGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHNSPCKVTGRCGSVLVRLIPAPRGTGIVSA- |
LGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPH..PCKVTG.CGSVLVRLIPAPRGTGIVSA. | |
Retrocopy | LGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGCCGSVLVRLIPAPRGTGIVSA< |
Parental | PVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVKTH |
PVPKKLLMMAGIDDCYTSARGCTATLGNF..ATFDAI.K.YSYLTPD.WKETVFTKS.YQEFT.H.VKTH | |
Retrocopy | PVPKKLLMMAGIDDCYTSARGCTATLGNF--ATFDAIFKIYSYLTPDFWKETVFTKSLYQEFTHHPVKTH |
Parental | TRVSMQRTQAPAVSTT |
.RVSMQRTQ.PA..TT | |
Retrocopy | PRVSMQRTQVPAEATT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |