RetrogeneDB ID: | retro_tsyr_1588 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_5:97263..97733(+) | ||
Located in intron of: | ENSTSYG00000010491 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 79.01 % |
Parental protein coverage: | 70.22 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 4 |
Parental | EENYLFSLPIKESE-IIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEV |
.E.YLFSLPIKESE.IIDFFLGASLK..VLKIMPVQKQTRAG.RTRFKAFVAI.DY.GHV.LGVKCSKEV | |
Retrocopy | KEIYLFSLPIKESE<IIDFFLGASLKGGVLKIMPVQKQTRAGLRTRFKAFVAIRDYLGHVSLGVKCSKEV |
Parental | ATAIRGAIIL-AKLSIVPVRRGYWGNKIGKPHNSPCKVTGRCGSVLVRLIP-APRGTGIVSAPVPKKLLM |
ATAI...I.L.AKLSI.PVRRGYW.NKIGKPH..PCKVT..CGSVLVRL....PRGTGI..APVPKKLLM | |
Retrocopy | ATAI*RPILL<AKLSIIPVRRGYW*NKIGKPHTVPCKVTRYCGSVLVRLLS<SPRGTGII*APVPKKLLM |
Parental | MAGIDDCYT-SARGCTATLGNF |
MAGIDDCYT...RGC.A....F | |
Retrocopy | MAGIDDCYT<LGRGCAAAKATF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |