RetrogeneDB ID: | retro_tsyr_169 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_4350:8488..9062(-) | ||
Located in intron of: | ENSTSYG00000000017 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 88.14 % |
Parental protein coverage: | 85.33 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | LVKDMKIKSLEENYLFSLPIKESEIIDFFLG-ASLKDEVLKIMPVQKQTRAGQRTRFKA-FVAIGDYNGH |
LVKDMKIKSLEE.YLFSLPIKESEIIDFFL..ASLKDEVLKIMPVQKQTRAGQ.TRFKA.FVAIGDYNGH | |
Retrocopy | LVKDMKIKSLEEIYLFSLPIKESEIIDFFLA<ASLKDEVLKIMPVQKQTRAGQQTRFKA<FVAIGDYNGH |
Parental | VGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHNSPCKVTGRCGSVLVRLIPAPRGTGIVS |
VGLGVKCSKEVATAI.G.IILAKLSI.PVRRGYWGNKI.K.H..PCKVTG..GSVLVRLIPAPRGTG..S | |
Retrocopy | VGLGVKCSKEVATAIGGVIILAKLSIIPVRRGYWGNKISKSHTVPCKVTGS*GSVLVRLIPAPRGTGMDS |
Parental | APVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETV |
APVPKKLLMM.GIDD.YTSARGC.ATLGNFAKAT.DAISKTYSYLTPDLWK... | |
Retrocopy | APVPKKLLMMTGIDDDYTSARGCGATLGNFAKATIDAISKTYSYLTPDLWKDSI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |