RetrogeneDB ID: | retro_tsyr_689 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_169699:719..1322(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 95.54 % |
Parental protein coverage: | 89.78 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | LVKDMKIKSLEENYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVG |
LVKDMKIKSLE..YLFSLPIKESEIIDFFLGASLK.EVLKIMPVQKQTRAGQ.TRFKAFVAIGDYNGHVG | |
Retrocopy | LVKDMKIKSLEI-YLFSLPIKESEIIDFFLGASLKNEVLKIMPVQKQTRAGQQTRFKAFVAIGDYNGHVG |
Parental | LGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHNSPCKVTGRCGSVLVRLIPAPRGTGIVSAP |
LGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPH..PCKVTG.CGSVLVRLIPAPRGTGIVS.P | |
Retrocopy | LGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGHCGSVLVRLIPAPRGTGIVSGP |
Parental | VPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFT |
VPKKLLMMAGIDDCYT.ARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFT | |
Retrocopy | VPKKLLMMAGIDDCYTLARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |