RetrogeneDB ID: | retro_tsyr_638 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_15812:20578..21009(+) | ||
Located in intron of: | ENSTSYG00000010784 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 66.23 % |
Parental protein coverage: | 65.78 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | LVKDMKIKSLEENYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY-NGHV |
LVKDMKIKSL.E..LF..PIKES.IIDFFLGAS.K.E.L.IMPVQK...AGQRT.FK...AIGDY.N.H. | |
Retrocopy | LVKDMKIKSLGEI*LFP-PIKESRIIDFFLGASAKGEALEIMPVQKEICAGQRTMFKVLAAIGDY>NSHI |
Parental | GLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHNSPCK-VTGRCGSVLVRLIPAPRGTGIVS |
.LGVKCSKEVATAI..A.IL.K.S.VPV.RGY.GN..GK.H..PC..VTG.C...L...IP..RGTG.V. | |
Retrocopy | SLGVKCSKEVATAIQRATILVKFSTVPVWRGY*GNNTGKSHSIPCR<VTGCCCALL---IPVLRGTGTVL |
Parental | A-PVPKKLLMM |
A.PVPKK.L.. | |
Retrocopy | A<PVPKKMLLL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |