RetrogeneDB ID: | retro_tsyr_61 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_1479:76949..77562(+) | ||
Located in intron of: | ENSTSYG00000000430 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 82.38 % |
Parental protein coverage: | 91.56 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | IKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQR-TRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAII |
IK.SEIIDFFLG.SLK.EV.KIMP.QKQTRAGQ..TRFKAFVAI.DY...V.L.VKCSKEVA.AIRGAII | |
Retrocopy | IKKSEIIDFFLGTSLKYEVMKIMPLQKQTRAGQQ<TRFKAFVAIRDY---VRLDVKCSKEVANAIRGAII |
Parental | LAKLSIVPVRRGYWGNKIGKPHNSPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSA |
LAKLSI.PV.RGYW.NKIGKPH..PCKVTG.CGSVLV.LIP.PRGT.I..APVPKKLLMMAGIDDCYTSA | |
Retrocopy | LAKLSIIPVQRGYWRNKIGKPHTVPCKVTGCCGSVLVLLIPDPRGTSIL*APVPKKLLMMAGIDDCYTSA |
Parental | RGCTATLGNFAKATFDAISKTYSY-LTP--DLWKETVFTKSPYQEFTDHLVKTHTRVSMQRTQAPAVSTT |
RGCTATLG.FAK.TFDAI.KTYSY.L.P...LWKETVFTKSPYQEFT.HLVKTHTRV.MQRTQAPAV..T | |
Retrocopy | RGCTATLGDFAKTTFDAICKTYSY<LDP*KSLWKETVFTKSPYQEFTHHLVKTHTRVFMQRTQAPAVAIT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |