RetrogeneDB ID: | retro_tsyr_2175 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_99273:25..454(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 76.19 % |
Parental protein coverage: | 64.44 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | RTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHNSPCKVTGRCGS |
RTRFK..VAIGD..GHVGLGVKCSKEVATA.RG..ILAKLSIVPVRRGYWG..I.KPH..PCKVT..CG. | |
Retrocopy | RTRFKTCVAIGDHQGHVGLGVKCSKEVATALRGPSILAKLSIVPVRRGYWGTQIDKPHTVPCKVTSCCGP |
Parental | VLVRLIPAPRG-TGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISK-TYSYLTPDLWKE |
VLV.LIPAPRG.TGI..APV.KKL..MAGIDDC.TSAR.C..TLGNFAKATF.A.S..TYS.LTPDLWKE | |
Retrocopy | VLVCLIPAPRG>TGIILAPVSKKL--MAGIDDCHTSARDCPDTLGNFAKATFEAVSG<TYSCLTPDLWKE |
Parental | TVFTKSP |
.V..K.P | |
Retrocopy | IVLAKPP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |