RetrogeneDB ID: | retro_tsyr_1505 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_46954:10829..11205(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 69.84 % |
Parental protein coverage: | 55.56 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | LVKDMKIKSLEENYLFSLPIKESEIIDFFLGASL-KDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHV |
L.KDMK.KS..E.YLFSLP.K.SEIIDFF.G..L..DE.L.IM.V.K.T...Q.TRFKAFVAIGDYNGHV | |
Retrocopy | LGKDMKSKSPQEIYLFSLPNKKSEIIDFFIGDLL>MDEILEIMLVHKPTGTSQQTRFKAFVAIGDYNGHV |
Parental | GLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHNSPCKVTGRCGSVLV |
GLG.KCSKE.AT.I.GAI.L.K..IVPV.RG.WGNKIGK.H..P.KVT..C.SVLV | |
Retrocopy | GLGIKCSKEIATTIQGAIALTKFTIVPVQRGSWGNKIGKTHIVP*KVTRYCDSVLV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |