RetrogeneDB ID: | retro_tsyr_472 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_123658:3424..4029(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 89.16 % |
Parental protein coverage: | 89.78 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | LVKDMKIKSLEENYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVG |
LVKDMKIKSLEE.YLFSLPIKESEIIDFFLG.SLKDEVLKIMPVQKQT..GQR.RFKAFVAIGDYNGH.G | |
Retrocopy | LVKDMKIKSLEEIYLFSLPIKESEIIDFFLGVSLKDEVLKIMPVQKQTCSGQRSRFKAFVAIGDYNGHIG |
Parental | LGVKCSKEVATAI-RGAIILAKLSIVPVRRGYWGNKIGKPHNSPCKVTGRCGSVLVRLIPAPRGTGIVSA |
LGVKCSKEVA.AI..GAIILAKLSIVPVRRGYWG.KIGKPH..PCKV.GRCGSVLV.LIPAPRGT.IVSA | |
Retrocopy | LGVKCSKEVASAI<LGAIILAKLSIVPVRRGYWGHKIGKPHTVPCKVIGRCGSVLVHLIPAPRGTDIVSA |
Parental | PVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFT |
PVPK.LLMMA.IDDCYTSARGCTATLGNF.KATFDAISKTY.YLTPDLWKE.VFTKSPYQ..T | |
Retrocopy | PVPKTLLMMADIDDCYTSARGCTATLGNFTKATFDAISKTYRYLTPDLWKEIVFTKSPYQNST |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |