RetrogeneDB ID: | retro_tsyr_773 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_196267:450..1125(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 89.78 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | LVKDMKIKSLEENYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVG |
LVKDMKIKSLEE..LFS.PIK.SEIID.FLGASLKDEVLKIMPVQKQ.R.GQRTRFK.F.AIGDYNGHV. | |
Retrocopy | LVKDMKIKSLEEISLFSRPIKQSEIIDVFLGASLKDEVLKIMPVQKQDRTGQRTRFKVFAAIGDYNGHVS |
Parental | LGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHNSPCKVTGRCGSVLVRLIPAPRGTGIVSAP |
LGVKCSKEVATAIRGAIIL..LSIVPVRRGYWGNKIGKPH..P.KVTGRCGSVLV.LIPAPRGTGIV.AP | |
Retrocopy | LGVKCSKEVATAIRGAIILVVLSIVPVRRGYWGNKIGKPHTVPYKVTGRCGSVLVSLIPAPRGTGIVLAP |
Parental | VPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVKTHT |
VPKKLL.MAGIDDCYTSARGCTAT.GNFAKATFDAISKTYSYL.PDLWKETVFTK.PYQEFTDHLVKTHT | |
Retrocopy | VPKKLLVMAGIDDCYTSARGCTATRGNFAKATFDAISKTYSYLNPDLWKETVFTKTPYQEFTDHLVKTHT |
Parental | RVSMQRTQAPAVSTT |
RVSM.RTQAPAV.TT | |
Retrocopy | RVSMKRTQAPAVATT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |