RetrogeneDB ID: | retro_tsyr_622 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_152680:4158..4602(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 76.97 % |
Parental protein coverage: | 66.22 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | KEVATAIRGAIILA-KLSIVPVRRGYWGNKIGKPHNSPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKL |
KE.ATAIRGAIILA.KLS.VPV.RG.WG.K...PH..PCKVTG.CG.VLV.LIPAPRGTGIV.AP.PKKL | |
Retrocopy | KEEATAIRGAIILA<KLSSVPVWRGCWGHKVS*PHTVPCKVTGLCGFVLVCLIPAPRGTGIVLAPMPKKL |
Parental | LMMAGIDDCYTSARGCTATLGNFAKATFDAISKT-YSYLT-PDLWKETVFTKSPYQEFTDHLVKTHTRVS |
L.MAGIDDC..SARG..ATL.NFAKA.FDA.SKT..SYLT.PD.WKETVFT.SPYQEFT.HLVKTHTRVS | |
Retrocopy | LLMAGIDDCHPSARGSPATLSNFAKAIFDAVSKT<LSYLT<PDFWKETVFTQSPYQEFTGHLVKTHTRVS |
Parental | MQRTQAPAVSTT |
..RTQ.P.V.TT | |
Retrocopy | VPRTQVPTVATT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |