RetrogeneDB ID: | retro_tsyr_186 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_4813:62534..63122(+) | ||
Located in intron of: | ENSTSYG00000000505 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 72.64 % |
Parental protein coverage: | 88. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | ENYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRF-KAFVAIG-DYNGHVGLGVKCSKEV |
E.Y.F.L.IKESEIIDFFLGASLKDEVLKIMPV.KQT..G..TR........G...NGH.GLGVKCSKE. | |
Retrocopy | EIYPFFLTIKESEIIDFFLGASLKDEVLKIMPVPKQTHTGRQTRL>RRLLPLGTNNNGHDGLGVKCSKEA |
Parental | ATAIRGAIILAKLSIVPVRRGYWGNKIGKPHNSPCKVTGRCGSVLVRLIPAPRGTGIVSA-PVPKKLLMM |
.TAIRGAIILAKL..VPV.RGY.GNKI...H...CKVTG.CGSVLV.LIP.PR..GI.SA.P.PKKL.MM | |
Retrocopy | GTAIRGAIILAKLFTVPVWRGY*GNKIRRLHVVLCKVTGCCGSVLVPLIPIPRSNGIISA<PMPKKLSMM |
Parental | AGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVKTH |
AGIDDCYT....CT.TLGNF.KATFDAISKTYS.LTPDL.KET.FTKS.Y.EFT.HLV.TH | |
Retrocopy | AGIDDCYTC---CTVTLGNFTKATFDAISKTYSNLTPDLRKETLFTKSSYKEFTNHLV*TH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |