RetrogeneDB ID: | retro_tsyr_922 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_241026:1030..1536(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 91.76 % |
Parental protein coverage: | 75.11 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHNSPCKVTGRCGSVLVR |
..FVAIGD.NGHVGLGVKCSKE.ATAIRGAIILAKLSIVPVRRGYW.NKIGKPH..PCKVTGRCGSVLV. | |
Retrocopy | QVFVAIGDHNGHVGLGVKCSKEIATAIRGAIILAKLSIVPVRRGYWVNKIGKPHTVPCKVTGRCGSVLVC |
Parental | LIPAPRGTGIVSAP-VPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTK |
LIPAPRGTGI.SAP.VPKKLLMMAGIDDCYTS.RGCTATLGNFAKATFDAISKTYSYLTPD.WKETVFTK | |
Retrocopy | LIPAPRGTGIISAP<VPKKLLMMAGIDDCYTSTRGCTATLGNFAKATFDAISKTYSYLTPDVWKETVFTK |
Parental | SPYQEFTDHLVKTHTRVSMQRTQAPAVSTT |
SPY.EFTDHLVKTHTRVSMQRTQAPAV.TT | |
Retrocopy | SPYKEFTDHLVKTHTRVSMQRTQAPAVATT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |