RetrogeneDB ID: | retro_mputfur_316 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896903.1:5921816..5922225(+) | ||
Located in intron of: | ENSMPUG00000013673 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS3A | ||
Ensembl ID: | ENSMPUG00000007139 | ||
Aliases: | None | ||
Description: | ribosomal protein S3A [Source:HGNC Symbol;Acc:10421] |
Percent Identity: | 81.75 % |
Parental protein coverage: | 51.52 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | TTDGYLLRLFCVGFTKKR-NNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI |
TTDGYL...F.V.FTKK..NNQIRKTSYAQ.QQVRQI.KKMME..T...QTNDLKEVVNKLIPDS.GKD. | |
Retrocopy | TTDGYLFCPFRVSFTKKM>NNQIRKTSYAQYQQVRQIQKKMMETVT*VIQTNDLKEVVNKLIPDSTGKDT |
Parental | EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV |
EKACQSIYPL.DV.VRKVKMLKKPKFELGKLME.HG.GSSSGKATG.ET..K.ER.DGYEPPVQESV | |
Retrocopy | EKACQSIYPLYDVLVRKVKMLKKPKFELGKLMEIHGAGSSSGKATGNETSTKAERGDGYEPPVQESV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |