RetrogeneDB ID: | retro_mputfur_278 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896901.1:13119614..13120038(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS3A | ||
Ensembl ID: | ENSMPUG00000007139 | ||
Aliases: | None | ||
Description: | ribosomal protein S3A [Source:HGNC Symbol;Acc:10421] |
Percent Identity: | 67.12 % |
Parental protein coverage: | 54.92 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | TMIEAHVDVKTTDGYLLRLFCVGFT-KKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNK |
T..EAH.DV..T..YL..LFCVG.T.KK.N.QI.KTSYAQHQQV.QI..KMMEIMT.E..TN.LKE.V.K | |
Retrocopy | TKTEAHFDVRITRDYLFSLFCVGST>KKCNSQIQKTSYAQHQQVHQIWEKMMEIMTQEL*TNSLKEAVSK |
Parental | LIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE |
L..DS....IE.......P.HDVFVRK.KMLKKP.FELGKL.ELHGEG..SGKA.GDET.A..E.A.GYE | |
Retrocopy | LFADSTEEHIENTS---HPPHDVFVRKAKMLKKPRFELGKLLELHGEGGRSGKAPGDETSA-AEQACGYE |
Parental | PPVQES |
PPVQES | |
Retrocopy | PPVQES |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |