RetrogeneDB ID: | retro_dord_752 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_75416:1771..2287(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000002250 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 82.95 % |
Parental protein coverage: | 66.16 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | KGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVAFRKF |
KGAKKK.VDPFSKKDWYDVKA.A.FNIRNI.KTLVTRTQGTK.ASDGLKG.VFE..LADLQNDEV.FRKF | |
Retrocopy | KGAKKKMVDPFSKKDWYDVKALATFNIRNICKTLVTRTQGTKMASDGLKGWVFEMGLADLQNDEVVFRKF |
Parental | KLITEDVQGK-NCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTK-KRNNQIRK |
KLIT..VQGK.NCLTNFHGMDL..D.MCSMVKK.QT.IEAHVDVKT.DGYLLRLFCVGFTK.K.NNQI.K | |
Retrocopy | KLIT--VQGK>NCLTNFHGMDLN*DEMCSMVKK*QTIIEAHVDVKTKDGYLLRLFCVGFTK<KPNNQICK |
Parental | TSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKL |
TSYAQHQQV..I.K.MMEIMT.EV.TNDLKEV.N.. | |
Retrocopy | TSYAQHQQVCRIWKEMMEIMTQEVKTNDLKEVANNI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |