RetrogeneDB ID: | retro_pcap_395 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_67281:3741..4272(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FTH1 | ||
Ensembl ID: | ENSPCAG00000010377 | ||
Aliases: | None | ||
Description: | ferritin, heavy polypeptide 1 [Source:HGNC Symbol;Acc:3976] |
Percent Identity: | 63.84 % |
Parental protein coverage: | 97.25 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MTTTFPSQVRQNYSQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKL |
M.T..PSQVRQNY.QD.EAA.NR.INLELYAS.VY.SM.Y.F..D.VALKNFA.YFL.QSH.E.E.A..L | |
Retrocopy | MATEEPSQVRQNYHQDCEAAVNRHINLELYASFVYQSMAYHFEQDEVALKNFASYFLRQSHKEQENAKML |
Parental | MKLQNQRGGRIFLNDIKKPDRDDWESGLNAMECALFLEKNVNQSLLDLHKLATEKNDPHLCDFIETHYLD |
.K.QNQRGG...L..I..PD..DW.SG..AM.CAL.LE...NQSLLDL..LATEK.DP.LC.F...H.L. | |
Retrocopy | LKVQNQRGGNFELRGIRRPDLRDWGSGFIAMQCALHLEQTLNQSLLDLYQLATEKCDPQLCHFLKSHFLN |
Parental | EQVKSIKQLGDYVTNLRKMGAPESGLAEYLFDKHTMG |
E.VK.IK.LGD.VTNLR..GAP...LA.Y.FDK...G | |
Retrocopy | EKVKTIKELGDHVTNLRRLGAPVTILADYFFDKFILG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |