Parental gene:

Fth1, ENSRNOG00000022619

Aliases:Fth1, Fth
Description:ferritin heavy chain [Source:RefSeq peptide;Acc:NP_036980]
Organism:Rat (Rattus norvegicus)
Coordinates:1:232979053..232981410(+)


>ENSRNOG00000022619
ATGACCACCGCGTCTCCCTCGCAAGTGCGCCAGAACTACCACCAGGACTCGGAGGCTGCCATCAACCGCCAGATCAACCT
GGAGTTGTATGCCTCCTACGTCTATCTGTCCATGTCTTGTTATTTTGACCGGGATGATGTGGCCCTGAAGAACTTTGCCA
AATACTTTCTCCATCAATCTCATGAAGAGAGGGAACATGCTGAGAAACTGATGAAGCTGCAGAACCAGCGAGGTGGACGA
ATCTTCCTGCAGGATATAAAGAAACCTGACCGTGATGACTGGGAGAGCGGGCTGAATGCAATGGAGTGTGCACTGCACTT
GGAAAAGAGTGTGAATCAGTCACTACTGGAACTTCACAAACTGGCTACTGACAAGAATGATCCCCACTTATGTGACTTCA
TTGAGACGCATTACCTGAATGAGCAGGTGAAATCCATTAAAGAACTGGGTGACCACGTGACCAACTTACGCAAGATGGGA
GCCCCTGAATCTGGCATGGCAGAATATCTCTTTGACAAGCACACCCTGGGACACGGTGATGAGAGCTAA

Library Parental gene expression (RPM)
SRP017611_liver 782 .04 RPM
SRP017611_kidney 1743 .16 RPM
SRP017611_brain 763 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016831 possible_ortholog 1 retrogene
Canis familiaris ENSCAFG00000015901 possible_ortholog 1 retrogene
Callithrix jacchus ENSCJAG00000019089 ortholog_one2many 16 retrogenes
Cavia porcellus ENSCPOG00000026586 possible_ortholog 3 retrogenes
Dasypus novemcinctus ENSDNOG00000017128 ortholog_one2many 83 retrogenes
Felis catus ENSFCAG00000007382 possible_ortholog 1 retrogene
Homo sapiens ENSG00000167996 ortholog_one2one 20 retrogenes
Gorilla gorilla ENSGGOG00000027722 ortholog_one2many 7 retrogenes
Latimeria chalumnae ENSLACG00000017426 ortholog_one2many 1 retrogene
Loxodonta africana ENSLAFG00000004824 ortholog_one2many 12 retrogenes
Myotis lucifugus ENSMLUG00000025726 possible_ortholog 16 retrogenes
Monodelphis domestica ENSMODG00000007582 ortholog_one2many 9 retrogenes
Mus musculus ENSMUSG00000024661 ortholog_one2one 4 retrogenes
Nomascus leucogenys ENSNLEG00000003321 ortholog_one2one 29 retrogenes
Oryctolagus cuniculus ENSOCUG00000014108 ortholog_one2many 4 retrogenes
Procavia capensis ENSPCAG00000010377 ortholog_one2one 13 retrogenes
Pongo abelii ENSPPYG00000003173 ortholog_one2many 12 retrogenes
Rattus norvegicus ENSRNOG00000020843 other_paralog 7 retrogenes
Sus scrofa ENSSSCG00000014540 possible_ortholog 9 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000014521 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_71 50.29 95.05
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2. retro_rnor_264 80.57 96.15
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3. retro_rnor_427 95.60 100.00
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4. retro_rnor_1197 54.55 71.43
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5. retro_rnor_1280 78.87 76.92
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6. retro_rnor_1356 62.94 77.47
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7. retro_rnor_1832 98.90 100.00
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8. retro_rnor_2060 78.91 80.77
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9. retro_rnor_2163 92.39 100.00
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Download FASTA sequences of all ENSRNOG00000022619 retrocopies