Parental gene:

FTH1, ENSNLEG00000003321

Aliases:None
Description:Ferritin [Source:UniProtKB/TrEMBL;Acc:G1QT22]
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397360.1:915063..918424(-)


>ENSNLEG00000003321
ATGACGACCGCGTCCACCTCGCAGGTGCGCCAGAACTACCACCAGGACTCAGAGGCCGCCATCAACCGCCAGATCAACCT
GGAGCTCTACGCCTCCTACGTTTACCTGTCCATGTCTTACTACTTTGACCGTGATGATGTGGCTTTGAAGAACTTTGCCA
AATACTTTCTTCACCAATCTCATGAGGAGAGGGAACATGCTGAGAGACTGATGAAGCTGCAGAACCAACGAGGTGGCCGA
ATCTTCCTTCAGGATATCAAGAAACCAGACTGTGATGACTGGGAGAGCGGGCTGAATGCGATGGAGTGTGCATTACATTT
GGAAAAAAATGTGAATCAGTCACTACTGGAACTGCACAAACTGGCCACTGACAAAAATGACCCGCATTTGTGTGACTTCA
TTGAGACACATTACCTGAATGAGCAGGTGAAAGCCATCAAAGAATTGGGTGACCACGTGACCAACTTGCGCAAGATGGGA
GCACCCGAATCTGGCTTGGCAGAATATCTCTTTGACAAGCACACCCTGGGAGACAGTGATAATGAAAGCTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016831 possible_ortholog 1 retrogene
retro_amel_115,
Canis familiaris ENSCAFG00000015901 possible_ortholog 1 retrogene
retro_cfam_150,
Callithrix jacchus ENSCJAG00000019089 ortholog_one2many 16 retrogenes
retro_cjac_1570, retro_cjac_1634, retro_cjac_2115, retro_cjac_2233, retro_cjac_230, retro_cjac_232, retro_cjac_2320, retro_cjac_2531, retro_cjac_278, retro_cjac_2843, retro_cjac_2857, retro_cjac_485, retro_cjac_519, retro_cjac_699, retro_cjac_767, retro_cjac_804,
Cavia porcellus ENSCPOG00000026586 possible_ortholog 3 retrogenes
retro_cpor_1309, retro_cpor_15, retro_cpor_157,
Dasypus novemcinctus ENSDNOG00000017128 possible_ortholog 83 retrogenes
retro_dnov_1017, retro_dnov_1074, retro_dnov_1078, retro_dnov_110, retro_dnov_1179, retro_dnov_1188, retro_dnov_1196, retro_dnov_1201, retro_dnov_1205, retro_dnov_1271, retro_dnov_1352, retro_dnov_1356, retro_dnov_1369, retro_dnov_1397, retro_dnov_1415, retro_dnov_1425, retro_dnov_1446, retro_dnov_1489, retro_dnov_1526, retro_dnov_1535, retro_dnov_1554, retro_dnov_1565, retro_dnov_162, retro_dnov_1627, retro_dnov_1640, retro_dnov_1777, retro_dnov_1787, retro_dnov_1792, retro_dnov_1827, retro_dnov_1851, retro_dnov_1865, retro_dnov_1875, retro_dnov_189, retro_dnov_197, retro_dnov_2005, retro_dnov_2065, retro_dnov_2093, retro_dnov_2097, retro_dnov_2109, retro_dnov_2124, retro_dnov_2136, retro_dnov_2154, retro_dnov_2173, retro_dnov_220, retro_dnov_2216, retro_dnov_2231, retro_dnov_2241, retro_dnov_2251, retro_dnov_2356, retro_dnov_2388, retro_dnov_2399, retro_dnov_242, retro_dnov_2443, retro_dnov_2444, retro_dnov_2454, retro_dnov_2476, retro_dnov_2483, retro_dnov_2489, retro_dnov_2511, retro_dnov_2528, retro_dnov_2554, retro_dnov_2579, retro_dnov_2607, retro_dnov_2626, retro_dnov_2646, retro_dnov_304, retro_dnov_383, retro_dnov_409, retro_dnov_422, retro_dnov_471, retro_dnov_517, retro_dnov_52, retro_dnov_55, retro_dnov_589, retro_dnov_61, retro_dnov_661, retro_dnov_675, retro_dnov_722, retro_dnov_726, retro_dnov_810, retro_dnov_864, retro_dnov_890, retro_dnov_994,
Felis catus ENSFCAG00000007382 possible_ortholog 1 retrogene
retro_fcat_887,
Homo sapiens ENSG00000167996 ortholog_one2one 20 retrogenes
retro_hsap_1243, retro_hsap_139, retro_hsap_1432, retro_hsap_2240, retro_hsap_2351, retro_hsap_2662, retro_hsap_2835, retro_hsap_2985, retro_hsap_2996, retro_hsap_316, retro_hsap_3208, retro_hsap_3293, retro_hsap_3589, retro_hsap_4083, retro_hsap_4232, retro_hsap_4671, retro_hsap_484, retro_hsap_81, retro_hsap_87, retro_hsap_898,
Gorilla gorilla ENSGGOG00000027722 ortholog_one2one 7 retrogenes
retro_ggor_1313, retro_ggor_153, retro_ggor_1671, retro_ggor_1858, retro_ggor_2835, retro_ggor_64, retro_ggor_726,
Latimeria chalumnae ENSLACG00000017426 ortholog_one2many 1 retrogene
retro_lcha_75,
Loxodonta africana ENSLAFG00000004824 possible_ortholog 12 retrogenes
retro_lafr_106, retro_lafr_1080, retro_lafr_1129, retro_lafr_138, retro_lafr_321, retro_lafr_433, retro_lafr_523, retro_lafr_53, retro_lafr_624, retro_lafr_717, retro_lafr_760, retro_lafr_966,
Myotis lucifugus ENSMLUG00000025726 possible_ortholog 16 retrogenes
retro_mluc_1030, retro_mluc_1142, retro_mluc_1211, retro_mluc_1354, retro_mluc_1464, retro_mluc_1769, retro_mluc_1984, retro_mluc_2002, retro_mluc_2091, retro_mluc_212, retro_mluc_2635, retro_mluc_361, retro_mluc_532, retro_mluc_556, retro_mluc_850, retro_mluc_885,
Monodelphis domestica ENSMODG00000007582 ortholog_one2many 9 retrogenes
retro_mdom_1134, retro_mdom_122, retro_mdom_1294, retro_mdom_1407, retro_mdom_1742, retro_mdom_300, retro_mdom_564, retro_mdom_643, retro_mdom_809,
Mus musculus ENSMUSG00000024661 ortholog_one2one 4 retrogenes
retro_mmus_2856, retro_mmus_3417, retro_mmus_3660, retro_mmus_45,
Nomascus leucogenys ENSNLEG00000004716 other_paralog 10 retrogenes
retro_nleu_1099, retro_nleu_1332, retro_nleu_1871, retro_nleu_1977, retro_nleu_2028, retro_nleu_2180, retro_nleu_2294, retro_nleu_2715, retro_nleu_272, retro_nleu_290,
Oryctolagus cuniculus ENSOCUG00000014108 possible_ortholog 4 retrogenes
retro_ocun_1172, retro_ocun_1179, retro_ocun_1598, retro_ocun_93,
Procavia capensis ENSPCAG00000010377 ortholog_one2one 13 retrogenes
retro_pcap_177, retro_pcap_217, retro_pcap_248, retro_pcap_276, retro_pcap_344, retro_pcap_348, retro_pcap_374, retro_pcap_379, retro_pcap_383, retro_pcap_395, retro_pcap_447, retro_pcap_5, retro_pcap_62,
Pongo abelii ENSPPYG00000003173 ortholog_one2many 12 retrogenes
retro_pabe_1034, retro_pabe_1186, retro_pabe_2410, retro_pabe_2483, retro_pabe_2484, retro_pabe_249, retro_pabe_3351, retro_pabe_3406, retro_pabe_35, retro_pabe_3713, retro_pabe_47, retro_pabe_479,
Rattus norvegicus ENSRNOG00000022619 ortholog_one2one 9 retrogenes
retro_rnor_1197, retro_rnor_1280, retro_rnor_1356, retro_rnor_1832, retro_rnor_2060, retro_rnor_2163, retro_rnor_264, retro_rnor_427, retro_rnor_71,
Sus scrofa ENSSSCG00000014540 possible_ortholog 9 retrogenes
retro_sscr_1045, retro_sscr_168, retro_sscr_286, retro_sscr_359, retro_sscr_498, retro_sscr_581, retro_sscr_78, retro_sscr_906, retro_sscr_949,
Ictidomys tridecemlineatus ENSSTOG00000014521 possible_ortholog 1 retrogene
retro_itri_250,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_72 80.56 98.36
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2. retro_nleu_78 62.84 100.00
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3. retro_nleu_136 66.10 96.72
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4. retro_nleu_303 91.80 100.00
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5. retro_nleu_383 92.39 100.00
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6. retro_nleu_738 69.12 73.77
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7. retro_nleu_747 82.81 69.40
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8. retro_nleu_936 95.88 92.90
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9. retro_nleu_1036 90.66 99.45
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10. retro_nleu_1157 53.12 51.37
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11. retro_nleu_1411 78.74 92.90
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12. retro_nleu_1503 61.65 70.49
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13. retro_nleu_1532 87.83 62.84
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14. retro_nleu_1732 97.39 62.84
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15. retro_nleu_1886 97.27 100.00
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16. retro_nleu_2049 93.99 100.00
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17. retro_nleu_2143 93.68 95.08
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18. retro_nleu_2162 64.09 98.91
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19. retro_nleu_2163 63.84 96.17
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20. retro_nleu_2281 95.63 100.00
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21. retro_nleu_2356 53.99 88.52
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22. retro_nleu_2357 52.50 86.89
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23. retro_nleu_2358 52.83 86.34
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24. retro_nleu_2359 51.88 86.34
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25. retro_nleu_2360 53.99 88.52
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26. retro_nleu_2361 51.88 86.89
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27. retro_nleu_2417 91.30 100.00
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28. retro_nleu_2433 84.85 89.62
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29. retro_nleu_2962 63.54 98.36
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Download FASTA sequences of all ENSNLEG00000003321 retrocopies