RetrogeneDB ID: | retro_pcap_177 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_137359:0..393(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FTH1 | ||
Ensembl ID: | ENSPCAG00000010377 | ||
Aliases: | None | ||
Description: | ferritin, heavy polypeptide 1 [Source:HGNC Symbol;Acc:3976] |
Percent Identity: | 60.31 % |
Parental protein coverage: | 71.98 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | NFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLNDIKKPDRDDWESGLNAMECALFLEKNVNQSLLDLHK |
.FA..FL.QS.....HA..L.KLQNQRGG.I.L..IK.PD..DWESGL..M.CAL.LE....QSLLDLH. | |
Retrocopy | SFAACFLCQSQQGHRHAKMLLKLQNQRGGCIVLCNIKMPDLADWESGLTTMQCALNLEQDISQSLLDLHR |
Parental | LATEKNDPHLCDFIETHYLDEQVKSIKQLGDYVTNLRKMGAPESGLAEYLFDKHTMGDSNE |
LAT.K.DP.LC.F.E.H.L.EQVK.IK.LGD.VTNL.K.GAP...LA.YLFDK....D... | |
Retrocopy | LATNKCDPQLCHFLENHFLPEQVKTIKKLGDHVTNLHKLGAPDASLADYLFDKFNLDDRDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |