RetrogeneDB ID: | retro_shar_190 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL834595.1:545282..545582(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSSHAG00000011706 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 53.85 % |
Parental protein coverage: | 80. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 4 |
Parental | SAINEVVTREYTINIHKR-IHGVGFKKRAPRALKEIRKFAMKEM-GTPDVRIDTRLNKAVWAKGIRNVPY |
S.I...VT..YT..I....I.GV.FKK.AP..LK.I....MKEM.G..DV.ID..LNK....KGIRN.PY | |
Retrocopy | SIIH*LVTWKYTNSIQLK<IYGVNFKKHAPGNLK*IHNCTMKEM<GNGDVLID*ILNKVARLKGIRNIPY |
Parental | RI-RVRLSRKRNEDEDSPN-KLYTLVTYVPVTTF |
.I.....SRK.N.D..S.N.KL.T.VTYV.VTTF | |
Retrocopy | YI>EKYFSRKWNRDKNSSN>KLFTMVTYVSVTTF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |