RetrogeneDB ID: | retro_pcap_312 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_3175:68733..69028(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ACP1 | ||
Ensembl ID: | ENSPCAG00000012054 | ||
Aliases: | None | ||
Description: | acid phosphatase 1, soluble [Source:HGNC Symbol;Acc:122] |
Percent Identity: | 51.52 % |
Parental protein coverage: | 62.03 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | MAEQVPKSVLFVCLGNICRSPI-AEAVFRKLVADENLLDKWIIDSGAVSDWNVGRSPDPRAVSCLRNHDI |
MAE..P..VLFVCL.NI..SP..A.AVFRKLV...NLLDK..I.S...........PD.....C...H.I | |
Retrocopy | MAEKLPSFVLFVCLCNI*WSPY>A*AVFRKLVTNPNLLDK*RIASATTYTYEKENPPDY*GKNCTKKHGI |
Parental | NTAHKARQVTREDFVTFDYILCMDESNLR |
...H...QVT..DF.TF.YILCM.ESNL. | |
Retrocopy | PMNHTVQQVTQKDFATFYYILCMNESNLK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |