RetrogeneDB ID: | retro_chof_377 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_101496:4406..4865(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.24 % |
Parental protein coverage: | 96.84 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | PKSVLFVCLGNICRSPIAEAVFRKLVTDQNISDNWIIDSGAVSDWNVGRSPDPRAVSCLRNHDSNTAHKA |
PKSV.F.CLGNIC.SP.AEAVFRK.V.D.NISDN..IDS.A......G..PD.....C...HD....H.A | |
Retrocopy | PKSVVFECLGNICQSPTAEAVFRKFVID*NISDNRRIDSAATYTYEIGNPPDY*GQNCMKKHDILMNHVA |
Parental | RQVTKEDFATFDYILCMDESNLRDLNRKGSAVKNRKAKIELLGSYDPQKQLIIEDPYYGNDSDFETVYQQ |
.QVTKEDFATFDYILCMDESNLR.L.RKGS.V.N.KAK.ELLGSYDPQKQ...EDPYYGNDS.FETVYQQ | |
Retrocopy | WQVTKEDFATFDYILCMDESNLRGLTRKGSEVRNCKAKTELLGSYDPQKQFTFEDPYYGNDSNFETVYQQ |
Parental | CVRCCKAFLEKSQ |
CVRC.KA.LEKSQ | |
Retrocopy | CVRCWKAVLEKSQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |