RetrogeneDB ID: | retro_chof_1053 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_190544:3443..3905(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.08 % |
Parental protein coverage: | 97.47 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 2 |
Parental | PPKSVLFVCLGNICRSPIAEAVFRKLVTDQNISDNWIIDSGAVSDWN-VGRSPDPRAVSCLRNHDSNTAH |
PPKSVLF..LGNIC..PIAEAVFRKLVT.QNIS.NW.IDS.A.S.....G...D.R...C....D....H | |
Retrocopy | PPKSVLFLHLGNIC**PIAEAVFRKLVTAQNISNNWRIDSAATSQTR<IGNTSDYRGQNCTKKLDIPGNH |
Parental | KARQVTKEDFATFDYILCMDESNLRDLNRKGSAVKNRKAKIELLGSYDPQKQLIIEDP-YYGNDSDFETV |
.A.QVTK.DFATFD.ILC.DESNLRDLNRKGS.V.N.KAKIE.LGSYDPQKQLIIEDP.YYGNDSDFETV | |
Retrocopy | VAWQVTK*DFATFD*ILCLDESNLRDLNRKGSEV*NYKAKIEQLGSYDPQKQLIIEDP>YYGNDSDFETV |
Parental | YQQCVRCCKAFLEKSQ |
Y.QCV.CCKAFLE.SQ | |
Retrocopy | YLQCVKCCKAFLEESQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |