RetrogeneDB ID: | retro_chof_1833 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_39917:12694..13100(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 57.93 % |
Parental protein coverage: | 89.24 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | CRSPIAEAVFRKLVTDQNISDNWIIDSGAVSDW-NVGRSPDPRAVSCLRNHDSNTAHKARQVTKEDFATF |
C.SP...AVFRKLVTDQNISDNW.ID..A.S.....G..PD.....C....D....H.ARQVTK.DFATF | |
Retrocopy | CQSP--GAVFRKLVTDQNISDNWRIDRAATST*>EIGNPPDYQGQNCMKKLDIPMNHVARQVTKDDFATF |
Parental | DYILCMDESNLRDLNRKGSAVK-NRKAKIELLGSYDPQKQLIIEDPYYG-NDSDFETVYQQCVR-CCKAF |
DY.LCMDESN..DLNR.G..VK.N.K.KIELL.............P..G.NDS..ET.YQQCV..C.KAF | |
Retrocopy | DYTLCMDESNMSDLNRTGNEVK<NYKVKIELLYT---NTNILLKIPIMG<NDSNSETMYQQCVS<CSKAF |
Parental | LEKSQ |
LEKSQ | |
Retrocopy | LEKSQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |