RetrogeneDB ID: | retro_chof_999 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_182168:4021..4448(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.43 % |
Parental protein coverage: | 89.87 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | MAAQPPKSVLFVCLGNICRSPIAEAVFRKLVTDQNISDNWIIDSGAVSDWNVGRSPDPRAVSCLRNHDSN |
MAAQ.PK.VLFV.LGNIC.SP..EAVFRKLVT.QNISDNW..DS...S....G..PD.....C...H... | |
Retrocopy | MAAQEPKLVLFVYLGNICQSPSVEAVFRKLVTYQNISDNWRVDSATTSTYEIGNPPDY*G*NCMKKHGIP |
Parental | TAHKARQVTKEDFATFD-YILCMDESNLRDLNRKGSAVKNRKAKIELLGSYDPQKQLIIEDPYYGNDSDF |
..H.A.QVTKED.ATF..YIL.MD.SNLR.LNRKG..VKN.KAKIELLGSYD..KQL.IEDPY.GN.S.F | |
Retrocopy | MNHVAHQVTKEDSATFG>YILHMDKSNLRHLNRKGNEVKNCKAKIELLGSYDA*KQLMIEDPY*GNYSNF |
Parental | ETV |
ETV | |
Retrocopy | ETV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |