RetrogeneDB ID: | retro_chof_1259 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_239411:2531..2984(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 70.86 % |
Parental protein coverage: | 95.57 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MAAQPPKSVLFVCLGNICRSPIAEAVFRKLVTDQNISDNWIIDSGAVSDWNVGRSPDPRAVSCLRNHDSN |
MAAQ.PK.VLFV.LGNIC.SPIAEAVFRKLVTD.NIS..W.ID..A.S....G..PD.R...C...HD.. | |
Retrocopy | MAAQLPKLVLFVRLGNICQSPIAEAVFRKLVTD*NISHIWRIDCAATSTCEIGNPPDYRGQNCMKKHDIP |
Parental | TAHKARQVTKEDFATFDYILCMDESNLRDLNRKGSAVKNRKAKIELLGSYDPQKQLIIEDPYYGNDSDFE |
..H.A.QVTK.DF.TFDYIL..DESNLR.LNRKGS.VKN.K.KIELLGSYDPQKQLIIEDPYYGNDS.FE | |
Retrocopy | MNHVA*QVTKDDFTTFDYILYTDESNLRHLNRKGSEVKNCKMKIELLGSYDPQKQLIIEDPYYGNDSNFE |
Parental | TVYQQCVRCCK |
TVYQQ.....K | |
Retrocopy | TVYQQSISVLK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |