RetrogeneDB ID: | retro_chof_2653 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_94356:4975..5443(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.29 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | MAAQPPKSVLFVCLGNICRSPIAEAVFRKLVTDQNISDNWIIDSGAVSDWNVGR-SPDPRAVSCLRNHDS |
M.AQPPKSVLFVCLGNIC.S.IAEAVFRKLVT.QNISDNW...S.A.S....G...PD.........HD. | |
Retrocopy | MTAQPPKSVLFVCLGNICQSTIAEAVFRKLVTNQNISDNWRVNSAATSSYEIGH<PPDY*GQNFMKKHDI |
Parental | NTAHKARQVTKEDFATFDYILCMDESNLRDLNRKGSAVKNRKAKIELLGSYDP-QKQLIIEDPY-YGNDS |
...H.A.Q.TK..FATFDYILCMDESNLRDLNRK.S.VKN.KAKIELLGSYDP..KQLIIED.Y..GNDS | |
Retrocopy | PMTHVAWQFTKH-FATFDYILCMDESNLRDLNRKSSEVKNCKAKIELLGSYDP<KKQLIIEDLY<LGNDS |
Parental | DFETVYQQCVRCCKAFLEKSQ |
DFETVYQ.CVRCCKAFLEKSQ | |
Retrocopy | DFETVYQECVRCCKAFLEKSQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |