RetrogeneDB ID: | retro_chof_962 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_176303:2916..3252(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 60. % |
Parental protein coverage: | 71.52 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MAAQPPKSVLFVCLGNICRSPIAEAVFRKLVTDQNISDNWIIDSGAVSDWNVGRSPDPRAVSCLRNHDSN |
MAAQP.K.VLFVCLGNIC.SP.AEA.FRKLVTDQNIS.NW.ID..A.S.......PD.....C...HD.. | |
Retrocopy | MAAQPSKLVLFVCLGNICQSPVAEAAFRKLVTDQNISENWRIDCAATSTYEIRNPPDYQGQNCMKKHDIP |
Parental | TAHKAR-QVTKEDFATFDYILCMDE-SNLRDLNRKGSAVKNRKAK |
..H.A...VTK.....FDYILCMDE.S.LRDLNRK.S..K..K.K | |
Retrocopy | MNHVAL>HVTKR-LPKFDYILCMDE<SHLRDLNRKDSELKIAK*K |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |