RetrogeneDB ID: | retro_chof_1444 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_29561:9981..10424(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 64.05 % |
Parental protein coverage: | 94.3 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 4 |
Parental | MAAQPPKSVLFVCLGNICRSPIAEAVFRKLVTDQNISDNWIIDSGAVSDWNVGRSPDPRAVSCLRNHDSN |
M..QPPKSVL..CL.NIC.SPI.EAVFRKLVTDQNISDN..IDS........G..PD.....C...HD.. | |
Retrocopy | MVVQPPKSVLLLCLSNICHSPIGEAVFRKLVTDQNISDN*RIDSAKAYTYEIGNPPDY*GQNCMKKHDIP |
Parental | TAHKARQVTKEDFATFDYILCMDESNLRDLNR-KGSAVKNRK-AKIELLGSYDPQ-KQLIIEDPYYG-ND |
..H.A.QVTKEDFATFD.ILCMDESN.RDL.R.K...VK..K..KIE.LG..DPQ.KQLIIE.PYYG..D | |
Retrocopy | MNHVAQQVTKEDFATFDSILCMDESNMRDLSR<KNTEVKTAK<VKIEPLGELDPQ<KQLIIEMPYYG<DD |
Parental | SDFETVYQQCVRC |
SDFETVY...V.C | |
Retrocopy | SDFETVYNSVVKC |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |