RetrogeneDB ID: | retro_chof_2443 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_75974:4823..5298(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 69.81 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAAQPPKSVLFVCLGNICRSPIAEAVFRKLVTDQNISDNWIIDSGAVSDWNVGRSPDPRAVSCLRNHDSN |
MA.Q..KSVL.VCLGNIC..PIAEAVFRKL.TDQNIS.NW..DS.A......G..PD.....C...HD.. | |
Retrocopy | MAEQELKSVLYVCLGNICQPPIAEAVFRKLITDQNISHNWRTDSTATPTYEIGNPPDYWG*NCMKQHDIL |
Parental | TAHKARQVTKEDFATFDYILCMDESNL-RDLNRKGSAVKNRKAKIELLGSYDPQKQLIIEDPYYGNDSDF |
..H.A.Q.TK..FATFD.ILC.DESNL...LNRKG..VKN.KAKIEL.GSYDPQKQLIIEDPYY.NDSDF | |
Retrocopy | MNHNAWQATKDSFATFDFILCTDESNL>KELNRKGNQVKNCKAKIELPGSYDPQKQLIIEDPYYENDSDF |
Parental | ETVYQQCVRCCKAFLEKSQ |
ETV.QQCVRCCK.FLEKSQ | |
Retrocopy | ETVNQQCVRCCKVFLEKSQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |