RetrogeneDB ID: | retro_chof_2208 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_58268:4649..5086(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 65.31 % |
Parental protein coverage: | 92.41 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAAQPPKSVLFVCLGNICRSPIAEAVFRKLVTDQNISDNWIIDSGAVSDWNVGRSPDPRAVSCLRNHDSN |
.AAQ.PKSVLFVCLGNIC.SPIAEAVFRKLVTDQNISDN..IDS...S.......PD.........HD.. | |
Retrocopy | IAAQLPKSVLFVCLGNICPSPIAEAVFRKLVTDQNISDN*RIDSATTSTDEIENPPDYQGQNYMTKHDVP |
Parental | TAHKARQVTKEDFATFDYILCMDESNLRDLNRKGSAVKNRKAKIELLG-SYDPQKQLIIEDPYYGNDSDF |
..H.A.QVTKEDFATFD.I.CMDESN.RD.NRKG..V.N.K.K.E.LG.SYDP.K.LIIE..YYG.DSDF | |
Retrocopy | MNHVAWQVTKEDFATFDDIRCMDESNPRDVNRKGNEVNNCKVKTEPLG<SYDPRKELIIEHLYYGDDSDF |
Parental | ETVYQQC |
ET....C | |
Retrocopy | ETLPAVC |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |